Source code for models.slca_utils.convs.vits

""" Vision Transformer (ViT) in PyTorch

A PyTorch implement of Vision Transformers as described in:

'An Image Is Worth 16 x 16 Words: Transformers for Image Recognition at Scale'
    - https://arxiv.org/abs/2010.11929

`How to train your ViT? Data, Augmentation, and Regularization in Vision Transformers`
    - https://arxiv.org/abs/2106.10270

The official jax code is released and available at https://github.com/google-research/vision_transformer

DeiT model defs and weights from https://github.com/facebookresearch/deit,
paper `DeiT: Data-efficient Image Transformers` - https://arxiv.org/abs/2012.12877

Acknowledgments:
* The paper authors for releasing code and weights, thanks!
* I fixed my class token impl based on Phil Wang's https://github.com/lucidrains/vit-pytorch ... check it out
for some einops/einsum fun
* Simple transformer style inspired by Andrej Karpathy's https://github.com/karpathy/minGPT
* Bert reference code checks against Huggingface Transformers and Tensorflow Bert

Hacked together by / Copyright 2020, Ross Wightman
"""
import math
import logging
from functools import partial
from collections import OrderedDict

import torch
import torch.nn as nn
import torch.nn.functional as F

from timm.data import IMAGENET_DEFAULT_MEAN, IMAGENET_DEFAULT_STD, IMAGENET_INCEPTION_MEAN, IMAGENET_INCEPTION_STD
from timm.models.helpers import build_model_with_cfg, named_apply, adapt_input_conv, resolve_pretrained_cfg
from timm.models.layers import PatchEmbed, Mlp, DropPath, trunc_normal_, lecun_normal_

_logger = logging.getLogger(__name__)


def _cfg(url='', **kwargs):
    return {
        'url': url,
        'num_classes': 1000, 'input_size': (3, 224, 224), 'pool_size': None,
        'crop_pct': .9, 'interpolation': 'bicubic', 'fixed_input_size': True,
        'mean': IMAGENET_INCEPTION_MEAN, 'std': IMAGENET_INCEPTION_STD,
        'first_conv': 'patch_embed.proj', 'classifier': 'head',
        **kwargs
    }


default_cfgs = {
    # patch models (weights from official Google JAX impl)
    'vit_tiny_patch16_224': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'Ti_16-i21k-300ep-lr_0.001-aug_none-wd_0.03-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.03-res_224.npz'),
    'vit_tiny_patch16_384': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'Ti_16-i21k-300ep-lr_0.001-aug_none-wd_0.03-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.03-res_384.npz',
        input_size=(3, 384, 384), crop_pct=1.0),
    'vit_small_patch32_224': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'S_32-i21k-300ep-lr_0.001-aug_light1-wd_0.03-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.03-res_224.npz'),
    'vit_small_patch32_384': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'S_32-i21k-300ep-lr_0.001-aug_light1-wd_0.03-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.03-res_384.npz',
        input_size=(3, 384, 384), crop_pct=1.0),
    'vit_small_patch16_224': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'S_16-i21k-300ep-lr_0.001-aug_light1-wd_0.03-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.03-res_224.npz'),
    'vit_small_patch16_384': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'S_16-i21k-300ep-lr_0.001-aug_light1-wd_0.03-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.03-res_384.npz',
        input_size=(3, 384, 384), crop_pct=1.0),
    'vit_base_patch32_224': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'B_32-i21k-300ep-lr_0.001-aug_medium1-wd_0.03-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.03-res_224.npz'),
    'vit_base_patch32_384': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'B_32-i21k-300ep-lr_0.001-aug_light1-wd_0.1-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.03-res_384.npz',
        input_size=(3, 384, 384), crop_pct=1.0),
    'vit_base_patch16_224': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'B_16-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.01-res_224.npz'),
    'vit_base_patch16_384': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'B_16-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.01-res_384.npz',
        input_size=(3, 384, 384), crop_pct=1.0),
    'vit_base_patch8_224': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'B_8-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.0-sd_0.0--imagenet2012-steps_20k-lr_0.01-res_224.npz'),
    'vit_large_patch32_224': _cfg(
        url='',  # no official model weights for this combo, only for in21k
    ),
    'vit_large_patch32_384': _cfg(
        url='https://github.com/rwightman/pytorch-image-models/releases/download/v0.1-vitjx/jx_vit_large_p32_384-9b920ba8.pth',
        input_size=(3, 384, 384), crop_pct=1.0),
    'vit_large_patch16_224': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'L_16-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.1-sd_0.1--imagenet2012-steps_20k-lr_0.01-res_224.npz'),
    'vit_large_patch16_384': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/'
            'L_16-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.1-sd_0.1--imagenet2012-steps_20k-lr_0.01-res_384.npz',
        input_size=(3, 384, 384), crop_pct=1.0),

    'vit_huge_patch14_224': _cfg(url=''),
    'vit_giant_patch14_224': _cfg(url=''),
    'vit_gigantic_patch14_224': _cfg(url=''),

    # patch models, imagenet21k (weights from official Google JAX impl)
    'vit_tiny_patch16_224_in21k': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/Ti_16-i21k-300ep-lr_0.001-aug_none-wd_0.03-do_0.0-sd_0.0.npz',
        num_classes=21843),
    'vit_small_patch32_224_in21k': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/S_32-i21k-300ep-lr_0.001-aug_light1-wd_0.03-do_0.0-sd_0.0.npz',
        num_classes=21843),
    'vit_small_patch16_224_in21k': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/S_16-i21k-300ep-lr_0.001-aug_light1-wd_0.03-do_0.0-sd_0.0.npz',
        num_classes=21843),
    'vit_base_patch32_224_in21k': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/B_32-i21k-300ep-lr_0.001-aug_medium1-wd_0.03-do_0.0-sd_0.0.npz',
        num_classes=21843),
    'vit_base_patch16_224_in21k': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/B_16-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.0-sd_0.0.npz',
        # url='./B_16-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.0-sd_0.0.npz',
        num_classes=21843),
    'vit_base_patch8_224_in21k': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/B_8-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.0-sd_0.0.npz',
        num_classes=21843),
    'vit_large_patch32_224_in21k': _cfg(
        url='https://github.com/rwightman/pytorch-image-models/releases/download/v0.1-vitjx/jx_vit_large_patch32_224_in21k-9046d2e7.pth',
        num_classes=21843),
    'vit_large_patch16_224_in21k': _cfg(
        url='https://storage.googleapis.com/vit_models/augreg/L_16-i21k-300ep-lr_0.001-aug_medium1-wd_0.1-do_0.1-sd_0.1.npz',
        num_classes=21843),
    'vit_huge_patch14_224_in21k': _cfg(
        url='https://storage.googleapis.com/vit_models/imagenet21k/ViT-H_14.npz',
        hf_hub='timm/vit_huge_patch14_224_in21k',
        num_classes=21843),

    # SAM trained models (https://arxiv.org/abs/2106.01548)
    'vit_base_patch32_sam_224': _cfg(
        url='https://storage.googleapis.com/vit_models/sam/ViT-B_32.npz'),
    'vit_base_patch16_sam_224': _cfg(
        url='https://storage.googleapis.com/vit_models/sam/ViT-B_16.npz'),

    # deit models (FB weights)
    'deit_tiny_patch16_224': _cfg(
        url='https://dl.fbaipublicfiles.com/deit/deit_tiny_patch16_224-a1311bcf.pth',
        mean=IMAGENET_DEFAULT_MEAN, std=IMAGENET_DEFAULT_STD),
    'deit_small_patch16_224': _cfg(
        url='https://dl.fbaipublicfiles.com/deit/deit_small_patch16_224-cd65a155.pth',
        mean=IMAGENET_DEFAULT_MEAN, std=IMAGENET_DEFAULT_STD),
    'deit_base_patch16_224': _cfg(
        url='https://dl.fbaipublicfiles.com/deit/deit_base_patch16_224-b5f2ef4d.pth',
        mean=IMAGENET_DEFAULT_MEAN, std=IMAGENET_DEFAULT_STD),
    'deit_base_patch16_384': _cfg(
        url='https://dl.fbaipublicfiles.com/deit/deit_base_patch16_384-8de9b5d1.pth',
        mean=IMAGENET_DEFAULT_MEAN, std=IMAGENET_DEFAULT_STD, input_size=(3, 384, 384), crop_pct=1.0),
    'deit_tiny_distilled_patch16_224': _cfg(
        url='https://dl.fbaipublicfiles.com/deit/deit_tiny_distilled_patch16_224-b40b3cf7.pth',
        mean=IMAGENET_DEFAULT_MEAN, std=IMAGENET_DEFAULT_STD, classifier=('head', 'head_dist')),
    'deit_small_distilled_patch16_224': _cfg(
        url='https://dl.fbaipublicfiles.com/deit/deit_small_distilled_patch16_224-649709d9.pth',
        mean=IMAGENET_DEFAULT_MEAN, std=IMAGENET_DEFAULT_STD, classifier=('head', 'head_dist')),
    'deit_base_distilled_patch16_224': _cfg(
        url='https://dl.fbaipublicfiles.com/deit/deit_base_distilled_patch16_224-df68dfff.pth',
        mean=IMAGENET_DEFAULT_MEAN, std=IMAGENET_DEFAULT_STD, classifier=('head', 'head_dist')),
    'deit_base_distilled_patch16_384': _cfg(
        url='https://dl.fbaipublicfiles.com/deit/deit_base_distilled_patch16_384-d0272ac0.pth',
        mean=IMAGENET_DEFAULT_MEAN, std=IMAGENET_DEFAULT_STD, input_size=(3, 384, 384), crop_pct=1.0,
        classifier=('head', 'head_dist')),

    # ViT ImageNet-21K-P pretraining by MILL
    'vit_base_patch16_224_miil_in21k': _cfg(
        url='https://miil-public-eu.oss-eu-central-1.aliyuncs.com/model-zoo/ImageNet_21K_P/models/timm/vit_base_patch16_224_in21k_miil.pth',
        mean=(0, 0, 0), std=(1, 1, 1), crop_pct=0.875, interpolation='bilinear', num_classes=11221,
    ),
    'vit_base_patch16_224_miil': _cfg(
        url='https://miil-public-eu.oss-eu-central-1.aliyuncs.com/model-zoo/ImageNet_21K_P/models/timm'
            '/vit_base_patch16_224_1k_miil_84_4.pth',
        mean=(0, 0, 0), std=(1, 1, 1), crop_pct=0.875, interpolation='bilinear',
    ),
}


[docs] class Attention(nn.Module): def __init__(self, dim, num_heads=8, qkv_bias=False, attn_drop=0., proj_drop=0.): super().__init__() self.num_heads = num_heads head_dim = dim // num_heads self.scale = head_dim ** -0.5 self.qkv = nn.Linear(dim, dim * 3, bias=qkv_bias) self.attn_drop = nn.Dropout(attn_drop) self.proj = nn.Linear(dim, dim) self.proj_drop = nn.Dropout(proj_drop)
[docs] def forward(self, x): B, N, C = x.shape qkv = self.qkv(x).reshape(B, N, 3, self.num_heads, C // self.num_heads).permute(2, 0, 3, 1, 4) q, k, v = qkv.unbind(0) # make torchscript happy (cannot use tensor as tuple) attn = (q @ k.transpose(-2, -1)) * self.scale attn = attn.softmax(dim=-1) attn = self.attn_drop(attn) x = (attn @ v).transpose(1, 2).reshape(B, N, C) x = self.proj(x) x = self.proj_drop(x) return x
[docs] class Block(nn.Module): def __init__(self, dim, num_heads, mlp_ratio=4., qkv_bias=False, drop=0., attn_drop=0., drop_path=0., act_layer=nn.GELU, norm_layer=nn.LayerNorm): super().__init__() self.norm1 = norm_layer(dim) self.attn = Attention(dim, num_heads=num_heads, qkv_bias=qkv_bias, attn_drop=attn_drop, proj_drop=drop) # NOTE: drop path for stochastic depth, we shall see if this is better than dropout here self.drop_path = DropPath(drop_path) if drop_path > 0. else nn.Identity() self.norm2 = norm_layer(dim) mlp_hidden_dim = int(dim * mlp_ratio) self.mlp = Mlp(in_features=dim, hidden_features=mlp_hidden_dim, act_layer=act_layer, drop=drop)
[docs] def forward(self, x): x = x + self.drop_path(self.attn(self.norm1(x))) x = x + self.drop_path(self.mlp(self.norm2(x))) return x
[docs] class VisionTransformer(nn.Module): """ Vision Transformer A PyTorch impl of : `An Image is Worth 16x16 Words: Transformers for Image Recognition at Scale` - https://arxiv.org/abs/2010.11929 Includes distillation token & head support for `DeiT: Data-efficient Image Transformers` - https://arxiv.org/abs/2012.12877 """ def __init__(self, img_size=224, patch_size=16, in_chans=3, num_classes=1000, embed_dim=768, depth=12, num_heads=12, mlp_ratio=4., qkv_bias=True, representation_size=None, distilled=False, drop_rate=0., attn_drop_rate=0., drop_path_rate=0., embed_layer=PatchEmbed, norm_layer=None, act_layer=None, weight_init='', with_adapter=False, global_pool=False): """ Args: img_size (int, tuple): input image size patch_size (int, tuple): patch size in_chans (int): number of input channels num_classes (int): number of classes for classification head embed_dim (int): embedding dimension depth (int): depth of transformer num_heads (int): number of attention heads mlp_ratio (int): ratio of mlp hidden dim to embedding dim qkv_bias (bool): enable bias for qkv if True representation_size (Optional[int]): enable and set representation layer (pre-logits) to this value if set distilled (bool): model includes a distillation token and head as in DeiT models drop_rate (float): dropout rate attn_drop_rate (float): attention dropout rate drop_path_rate (float): stochastic depth rate embed_layer (nn.Module): patch embedding layer norm_layer: (nn.Module): normalization layer weight_init: (str): weight init scheme """ super().__init__() self.num_classes = num_classes self.num_features = self.embed_dim = embed_dim # num_features for consistency with other models self.out_dim = embed_dim self.num_tokens = 2 if distilled else 1 norm_layer = norm_layer or partial(nn.LayerNorm, eps=1e-6) act_layer = act_layer or nn.GELU self.with_adapter = with_adapter self.global_pool = global_pool self.patch_embed = embed_layer( img_size=img_size, patch_size=patch_size, in_chans=in_chans, embed_dim=embed_dim) num_patches = self.patch_embed.num_patches self.cls_token = nn.Parameter(torch.zeros(1, 1, embed_dim)) self.dist_token = nn.Parameter(torch.zeros(1, 1, embed_dim)) if distilled else None self.pos_embed = nn.Parameter(torch.zeros(1, num_patches + self.num_tokens, embed_dim)) self.pos_drop = nn.Dropout(p=drop_rate) dpr = [x.item() for x in torch.linspace(0, drop_path_rate, depth)] # stochastic depth decay rule self.blocks = nn.ModuleList([ Block( dim=embed_dim, num_heads=num_heads, mlp_ratio=mlp_ratio, qkv_bias=qkv_bias, drop=drop_rate, attn_drop=attn_drop_rate, drop_path=dpr[i], norm_layer=norm_layer, act_layer=act_layer) for i in range(depth)]) self.norm = norm_layer(embed_dim) # Representation layer if representation_size and not distilled: self.num_features = representation_size self.pre_logits = nn.Sequential(OrderedDict([ ('fc', nn.Linear(embed_dim, representation_size)), ('act', nn.Tanh()) ])) else: self.pre_logits = nn.Identity() # Classifier head(s) self.head = nn.Linear(self.num_features, num_classes) if num_classes > 0 else nn.Identity() self.head_dist = None if distilled: self.head_dist = nn.Linear(self.embed_dim, self.num_classes) if num_classes > 0 else nn.Identity() if self.with_adapter: self.adp_layers = [] for adp_i in range(4): self.adp_layers.append(self.get_adapter(embed_dim)) self.adp_layers = nn.ModuleList(self.adp_layers) self.adp_norm = nn.LayerNorm(embed_dim) self.extra_blocks = nn.ModuleList([]) self.init_weights(weight_init) if self.with_adapter: for adp_i in range(4): nn.init.constant_(self.adp_layers[adp_i][-2].bias, -2.19)
[docs] def get_adapter(self, embed_dim): return nn.Sequential( nn.Linear(embed_dim, embed_dim * 3, bias=False), nn.LayerNorm(embed_dim * 3), nn.GELU(), nn.Linear(embed_dim * 3, embed_dim, bias=False), nn.LayerNorm(embed_dim), nn.GELU(), nn.Linear(embed_dim, embed_dim, bias=True), nn.Sigmoid() )
[docs] def init_weights(self, mode=''): assert mode in ('jax', 'jax_nlhb', 'nlhb', '') head_bias = -math.log(self.num_classes) if 'nlhb' in mode else 0. trunc_normal_(self.pos_embed, std=.02) if self.dist_token is not None: trunc_normal_(self.dist_token, std=.02) if mode.startswith('jax'): # leave cls token as zeros to match jax impl named_apply(partial(_init_vit_weights, head_bias=head_bias, jax_impl=True), self) else: trunc_normal_(self.cls_token, std=.02) self.apply(_init_vit_weights)
def _init_weights(self, m): # this fn left here for compat with downstream users _init_vit_weights(m)
[docs] @torch.jit.ignore() def load_pretrained(self, checkpoint_path, prefix=''): _load_weights(self, checkpoint_path, prefix)
[docs] @torch.jit.ignore def no_weight_decay(self): return {'pos_embed', 'cls_token', 'dist_token'}
[docs] def get_classifier(self): if self.dist_token is None: return self.head else: return self.head, self.head_dist
[docs] def reset_classifier(self, num_classes, global_pool=''): self.num_classes = num_classes self.head = nn.Linear(self.embed_dim, num_classes) if num_classes > 0 else nn.Identity() if self.num_tokens == 2: self.head_dist = nn.Linear(self.embed_dim, self.num_classes) if num_classes > 0 else nn.Identity()
[docs] def forward_features(self, x, prompt=None, layer_feat=False): img = x x = self.patch_embed(x) cls_token = self.cls_token.expand(x.shape[0], -1, -1) # stole cls_tokens impl from Phil Wang, thanks prompt_length = 0 if self.dist_token is None and prompt is None: x = torch.cat((cls_token, x), dim=1) elif prompt is not None: x = torch.cat((prompt, cls_token, x), dim=1) prompt_length = prompt.size(1) else: x = torch.cat((cls_token, self.dist_token.expand(x.shape[0], -1, -1), x), dim=1) x[:, prompt_length:] = self.pos_drop(x[:, prompt_length:] + self.pos_embed) # x = self.blocks(x) feats = [] feats_l = [] for b_id, block in enumerate(self.blocks): x = block(x) if self.with_adapter and (b_id + 1) % (len(self.blocks) // 4) == 0: feats.append(x) if layer_feat: feats_l.append(x) if b_id == len(self.blocks) - 2: penultimate_feat = x.clone() if layer_feat: return feats_l if len(self.extra_blocks) > 0: assert not self.with_adapter outs = [self.norm(x)[:, 0]] for extra_block in self.extra_blocks: outs.append(extra_block(penultimate_feat)[:, 0]) return outs if self.with_adapter and self.training: adp_inp = feats[-1][:, 0].detach() masks = [] for adp_i, adp_layer in enumerate(self.adp_layers): m_ = adp_layer(adp_inp) # if adp_i==0: # m_ = m_.mean(1) # m_ = torch.sigmoid(m_) adp_inp = m_ * feats[adp_i][:, 0] + feats[adp_i][:, 0].detach() masks.append(m_) return adp_inp, torch.cat(masks, dim=1) # return self.adp_norm(adp_inp.unsqueeze(1)).squeeze(1) if self.global_pool: x = x[:, 1:, :].mean(dim=1) # global pool without cls token return self.norm(x) x = self.norm(x) if self.dist_token is None: if prompt is not None: return x[:, :prompt_length].mean(dim=1) return self.pre_logits(x[:, 0]) else: return x[:, 0] # , x[:, 1]
[docs] def forward(self, x, prompt=None, layer_feat=False): x = self.forward_features(x, prompt, layer_feat) if self.with_adapter and self.training: x = {'masks': x[1], 'features': x[0]} else: x = {'features': x} # if self.head_dist is not None: # x, x_dist = self.head(x[0]), self.head_dist(x[1]) # x must be a tuple # if self.training and not torch.jit.is_scripting(): # # during inference, return the average of both classifier predictions # return x, x_dist # else: # return (x + x_dist) / 2 # else: # x = self.head(x) return x
def _init_vit_weights(module: nn.Module, name: str = '', head_bias: float = 0., jax_impl: bool = False): """ ViT weight initialization * When called without n, head_bias, jax_impl args it will behave exactly the same as my original init for compatibility with prev hparam / downstream use cases (ie DeiT). * When called w/ valid n (module name) and jax_impl=True, will (hopefully) match JAX impl """ if isinstance(module, nn.Linear): if name.startswith('head'): nn.init.zeros_(module.weight) nn.init.constant_(module.bias, head_bias) elif name.startswith('pre_logits'): lecun_normal_(module.weight) nn.init.zeros_(module.bias) else: if jax_impl: nn.init.xavier_uniform_(module.weight) if module.bias is not None: if 'mlp' in name: nn.init.normal_(module.bias, std=1e-6) else: nn.init.zeros_(module.bias) else: trunc_normal_(module.weight, std=.02) if module.bias is not None: nn.init.zeros_(module.bias) elif jax_impl and isinstance(module, nn.Conv2d): # NOTE conv was left to pytorch default in my original init lecun_normal_(module.weight) if module.bias is not None: nn.init.zeros_(module.bias) elif isinstance(module, (nn.LayerNorm, nn.GroupNorm, nn.BatchNorm2d)): nn.init.zeros_(module.bias) nn.init.ones_(module.weight) @torch.no_grad() def _load_weights(model: VisionTransformer, checkpoint_path: str, prefix: str = ''): """ Load weights from .npz checkpoints for official Google Brain Flax implementation """ import numpy as np def _n2p(w, t=True): if w.ndim == 4 and w.shape[0] == w.shape[1] == w.shape[2] == 1: w = w.flatten() if t: if w.ndim == 4: w = w.transpose([3, 2, 0, 1]) elif w.ndim == 3: w = w.transpose([2, 0, 1]) elif w.ndim == 2: w = w.transpose([1, 0]) return torch.from_numpy(w) w = np.load(checkpoint_path) if not prefix and 'opt/target/embedding/kernel' in w: prefix = 'opt/target/' if hasattr(model.patch_embed, 'backbone'): # hybrid backbone = model.patch_embed.backbone stem_only = not hasattr(backbone, 'stem') stem = backbone if stem_only else backbone.stem stem.conv.weight.copy_(adapt_input_conv(stem.conv.weight.shape[1], _n2p(w[f'{prefix}conv_root/kernel']))) stem.norm.weight.copy_(_n2p(w[f'{prefix}gn_root/scale'])) stem.norm.bias.copy_(_n2p(w[f'{prefix}gn_root/bias'])) if not stem_only: for i, stage in enumerate(backbone.stages): for j, block in enumerate(stage.blocks): bp = f'{prefix}block{i + 1}/unit{j + 1}/' for r in range(3): getattr(block, f'conv{r + 1}').weight.copy_(_n2p(w[f'{bp}conv{r + 1}/kernel'])) getattr(block, f'norm{r + 1}').weight.copy_(_n2p(w[f'{bp}gn{r + 1}/scale'])) getattr(block, f'norm{r + 1}').bias.copy_(_n2p(w[f'{bp}gn{r + 1}/bias'])) if block.downsample is not None: block.downsample.conv.weight.copy_(_n2p(w[f'{bp}conv_proj/kernel'])) block.downsample.norm.weight.copy_(_n2p(w[f'{bp}gn_proj/scale'])) block.downsample.norm.bias.copy_(_n2p(w[f'{bp}gn_proj/bias'])) embed_conv_w = _n2p(w[f'{prefix}embedding/kernel']) else: embed_conv_w = adapt_input_conv( model.patch_embed.proj.weight.shape[1], _n2p(w[f'{prefix}embedding/kernel'])) model.patch_embed.proj.weight.copy_(embed_conv_w) model.patch_embed.proj.bias.copy_(_n2p(w[f'{prefix}embedding/bias'])) model.cls_token.copy_(_n2p(w[f'{prefix}cls'], t=False)) pos_embed_w = _n2p(w[f'{prefix}Transformer/posembed_input/pos_embedding'], t=False) if pos_embed_w.shape != model.pos_embed.shape: pos_embed_w = resize_pos_embed( # resize pos embedding when different size from pretrained weights pos_embed_w, model.pos_embed, getattr(model, 'num_tokens', 1), model.patch_embed.grid_size) model.pos_embed.copy_(pos_embed_w) model.norm.weight.copy_(_n2p(w[f'{prefix}Transformer/encoder_norm/scale'])) model.norm.bias.copy_(_n2p(w[f'{prefix}Transformer/encoder_norm/bias'])) if isinstance(model.head, nn.Linear) and model.head.bias.shape[0] == w[f'{prefix}head/bias'].shape[-1]: model.head.weight.copy_(_n2p(w[f'{prefix}head/kernel'])) model.head.bias.copy_(_n2p(w[f'{prefix}head/bias'])) if isinstance(getattr(model.pre_logits, 'fc', None), nn.Linear) and f'{prefix}pre_logits/bias' in w: model.pre_logits.fc.weight.copy_(_n2p(w[f'{prefix}pre_logits/kernel'])) model.pre_logits.fc.bias.copy_(_n2p(w[f'{prefix}pre_logits/bias'])) for i, block in enumerate(model.blocks.children()): block_prefix = f'{prefix}Transformer/encoderblock_{i}/' mha_prefix = block_prefix + 'MultiHeadDotProductAttention_1/' block.norm1.weight.copy_(_n2p(w[f'{block_prefix}LayerNorm_0/scale'])) block.norm1.bias.copy_(_n2p(w[f'{block_prefix}LayerNorm_0/bias'])) block.attn.qkv.weight.copy_(torch.cat([ _n2p(w[f'{mha_prefix}{n}/kernel'], t=False).flatten(1).T for n in ('query', 'key', 'value')])) block.attn.qkv.bias.copy_(torch.cat([ _n2p(w[f'{mha_prefix}{n}/bias'], t=False).reshape(-1) for n in ('query', 'key', 'value')])) block.attn.proj.weight.copy_(_n2p(w[f'{mha_prefix}out/kernel']).flatten(1)) block.attn.proj.bias.copy_(_n2p(w[f'{mha_prefix}out/bias'])) for r in range(2): getattr(block.mlp, f'fc{r + 1}').weight.copy_(_n2p(w[f'{block_prefix}MlpBlock_3/Dense_{r}/kernel'])) getattr(block.mlp, f'fc{r + 1}').bias.copy_(_n2p(w[f'{block_prefix}MlpBlock_3/Dense_{r}/bias'])) block.norm2.weight.copy_(_n2p(w[f'{block_prefix}LayerNorm_2/scale'])) block.norm2.bias.copy_(_n2p(w[f'{block_prefix}LayerNorm_2/bias']))
[docs] def resize_pos_embed(posemb, posemb_new, num_tokens=1, gs_new=()): # Rescale the grid of position embeddings when loading from state_dict. Adapted from # https://github.com/google-research/vision_transformer/blob/00883dd691c63a6830751563748663526e811cee/vit_jax/checkpoint.py#L224 _logger.info('Resized position embedding: %s to %s', posemb.shape, posemb_new.shape) ntok_new = posemb_new.shape[1] if num_tokens: posemb_tok, posemb_grid = posemb[:, :num_tokens], posemb[0, num_tokens:] ntok_new -= num_tokens else: posemb_tok, posemb_grid = posemb[:, :0], posemb[0] gs_old = int(math.sqrt(len(posemb_grid))) if not len(gs_new): # backwards compatibility gs_new = [int(math.sqrt(ntok_new))] * 2 assert len(gs_new) >= 2 _logger.info('Position embedding grid-size from %s to %s', [gs_old, gs_old], gs_new) posemb_grid = posemb_grid.reshape(1, gs_old, gs_old, -1).permute(0, 3, 1, 2) posemb_grid = F.interpolate(posemb_grid, size=gs_new, mode='bicubic', align_corners=False) posemb_grid = posemb_grid.permute(0, 2, 3, 1).reshape(1, gs_new[0] * gs_new[1], -1) posemb = torch.cat([posemb_tok, posemb_grid], dim=1) return posemb
[docs] def checkpoint_filter_fn(state_dict, model): """ convert patch embedding weight from manual patchify + linear proj to conv""" out_dict = {} if 'model' in state_dict: # For deit models state_dict = state_dict['model'] for k, v in state_dict.items(): if 'patch_embed.proj.weight' in k and len(v.shape) < 4: # For old models that I trained prior to conv based patchification O, I, H, W = model.patch_embed.proj.weight.shape v = v.reshape(O, -1, H, W) elif k == 'pos_embed' and v.shape != model.pos_embed.shape: # To resize pos embedding when using model at different size from pretrained weights v = resize_pos_embed( v, model.pos_embed, getattr(model, 'num_tokens', 1), model.patch_embed.grid_size) out_dict[k] = v return out_dict
# def _create_vision_transformer(variant, pretrained=False, default_cfg=None, **kwargs): # default_cfg = default_cfg or default_cfgs[variant] # if kwargs.get('features_only', None): # raise RuntimeError('features_only not implemented for Vision Transformer models.') # # NOTE this extra code to support handling of repr size for in21k pretrained models # default_num_classes = default_cfg['num_classes'] # num_classes = kwargs.get('num_classes', default_num_classes) # repr_size = kwargs.pop('representation_size', None) # if repr_size is not None and num_classes != default_num_classes: # # Remove representation layer if fine-tuning. This may not always be the desired action, # # but I feel better than doing nothing by default for fine-tuning. Perhaps a better interface? # _logger.warning("Removing representation layer for fine-tuning.") # repr_size = None # model = build_model_with_cfg( # VisionTransformer, variant, pretrained, # default_cfg=default_cfg, # representation_size=repr_size, # pretrained_filter_fn=checkpoint_filter_fn, # pretrained_custom_load='npz' in default_cfg['url'], # **kwargs) # return model def _create_vision_transformer(variant, pretrained=False, **kwargs): if kwargs.get('features_only', None): raise RuntimeError('features_only not implemented for Vision Transformer models.') if 'flexi' in variant: # FIXME Google FlexiViT pretrained models have a strong preference for bilinear patch / embed # interpolation, other pretrained models resize better w/ anti-aliased bicubic interpolation. _filter_fn = partial(checkpoint_filter_fn, interpolation='bilinear', antialias=False) else: _filter_fn = checkpoint_filter_fn # FIXME attn pool (currently only in siglip) params removed if pool disabled, is there a better soln? strict = True if 'siglip' in variant and kwargs.get('global_pool', None) != 'map': strict = False pretrained_cfg = resolve_pretrained_cfg(variant, pretrained_cfg=kwargs.pop('pretrained_cfg', None)) pretrained_cfg.custom_load = True return build_model_with_cfg( VisionTransformer, variant, pretrained, pretrained_cfg=pretrained_cfg, pretrained_filter_fn=_filter_fn, pretrained_strict=strict, **kwargs, )
[docs] def vit_base_patch16_224_in21k(pretrained=False, adapter=False, **kwargs): """ ViT-Base model (ViT-B/16) from original paper (https://arxiv.org/abs/2010.11929). ImageNet-21k weights @ 224x224, source https://github.com/google-research/vision_transformer. NOTE: this model has valid 21k classifier head and no representation (pre-logits) layer """ model_kwargs = dict( patch_size=16, embed_dim=768, depth=12, num_heads=12, with_adapter=adapter, **kwargs) model = _create_vision_transformer('vit_base_patch16_224_in21k', pretrained=pretrained, **model_kwargs) del model.head del model.norm model.norm = nn.LayerNorm(768) return model
[docs] def vit_base_patch16_224_mocov3(pretrained=False, adapter=False, **kwargs): """ ViT-Base model (ViT-B/16) from original paper (https://arxiv.org/abs/2010.11929). ImageNet-21k weights @ 224x224, source https://github.com/google-research/vision_transformer. NOTE: this model has valid 21k classifier head and no representation (pre-logits) layer """ model_kwargs = dict( patch_size=16, embed_dim=768, depth=12, num_heads=12, with_adapter=adapter, **kwargs) model = _create_vision_transformer('vit_base_patch16_224_in21k', pretrained=False, **model_kwargs) del model.head ckpt = torch.load('mocov3-vit-base-300ep.pth', map_location='cpu')['model'] state_dict = model.state_dict() state_dict.update(ckpt) model.load_state_dict(state_dict) del model.norm model.norm = nn.LayerNorm(768) return model